Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85aQ5SP85 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85aQ5SP85 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85aQ5SP85 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85aQ5SP85 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85aQ5SP85 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc85aQ5SP85 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc85aQ5SP85 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Gm27680-201ENSMUST00000184192 160 ntBASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc85aQ5SP85 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.58■□□□□ 0.25
Ccdc85aQ5SP85 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc85aQ5SP85 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc85aQ5SP85 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc85aQ5SP85 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc85aQ5SP85 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc85aQ5SP85 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ccdc85aQ5SP85 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Gm6745-201ENSMUST00000199216 526 ntBASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc85aQ5SP85 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Gm23984-201ENSMUST00000157139 203 ntBASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc85aQ5SP85 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc85aQ5SP85 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc85aQ5SP85 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc85aQ5SP85 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc85aQ5SP85 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.56■□□□□ 0.24
Ccdc85aQ5SP85 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc85aQ5SP85 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.56■□□□□ 0.24
Ccdc85aQ5SP85 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.56■□□□□ 0.24
Ccdc85aQ5SP85 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms