Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-3Q5R1E6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Gm10499-201ENSMUST00000174094 934 ntBASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Gm17807-201ENSMUST00000186869 298 ntBASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-3Q5R1E6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Gm11780-201ENSMUST00000136880 516 ntBASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Gm4535-201ENSMUST00000182274 558 ntBASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Gm43767-201ENSMUST00000198933 381 ntBASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Gm10355-201ENSMUST00000097146 517 ntBASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-3Q5R1E6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Gm18489-201ENSMUST00000172565 551 ntBASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.09□□□□□ -0.47
Trav6-3Q5R1E6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms