Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm27731-201ENSMUST00000185192 107 ntBASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps13aQ5H8C4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Gm16570-201ENSMUST00000161951 436 ntBASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps13aQ5H8C4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Mir8109-201ENSMUST00000184375 117 ntBASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Gm28911-201ENSMUST00000188837 117 ntBASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Gm8969-201ENSMUST00000199694 526 ntBASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Gm19220-201ENSMUST00000222682 803 ntBASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps13aQ5H8C4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13aQ5H8C4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Gm12341-201ENSMUST00000119724 503 ntBASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.71□□□□□ -0.05
Vps13aQ5H8C4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms