Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rc3h1Q4VGL6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Gm25948-201ENSMUST00000175334 112 ntBASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rc3h1Q4VGL6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Mir6956-201ENSMUST00000183598 62 ntBASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Rc3h1Q4VGL6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Gm15920-201ENSMUST00000118998 402 ntBASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rc3h1Q4VGL6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Mir449b-201ENSMUST00000104833 80 ntBASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.34■□□□□ 0.37
Rc3h1Q4VGL6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms