Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ckap2Q3V1H1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ckap2Q3V1H1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Gm16026-204ENSMUST00000162652 683 ntBASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Gm10175-201ENSMUST00000086013 645 ntBASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ckap2Q3V1H1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Gm15467-201ENSMUST00000120582 445 ntBASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Gm12260-201ENSMUST00000122447 411 ntBASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Gm27301-201ENSMUST00000184012 127 ntBASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Gm43514-201ENSMUST00000198852 424 ntBASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Gm10154-201ENSMUST00000084445 354 ntBASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ckap2Q3V1H1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Gm14494-201ENSMUST00000118786 435 ntBASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 Mir3113-201ENSMUST00000175478 76 ntBASIC17.23■□□□□ 0.35
Ckap2Q3V1H1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms