Protein–RNA interactions for Protein: Q3UTC0

B020004J07Rik, RIKEN cDNA B020004J07 gene, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004J07RikQ3UTC0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
B020004J07RikQ3UTC0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
B020004J07RikQ3UTC0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Gm9824-201ENSMUST00000178707 561 ntBASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
B020004J07RikQ3UTC0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
B020004J07RikQ3UTC0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004J07RikQ3UTC0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004J07RikQ3UTC0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004J07RikQ3UTC0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
B020004J07RikQ3UTC0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms