Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.07■□□□□ 0
Fam196aQ3USH1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Mir1982-201ENSMUST00000157368 74 ntBASIC15.07■□□□□ 0
Fam196aQ3USH1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.07■□□□□ 0
Fam196aQ3USH1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.07■□□□□ 0
Fam196aQ3USH1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.07■□□□□ 0
Fam196aQ3USH1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Fam196aQ3USH1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.06■□□□□ 0
Fam196aQ3USH1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.06■□□□□ 0
Fam196aQ3USH1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.06■□□□□ 0
Fam196aQ3USH1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Fam196aQ3USH1 Gm10766-202ENSMUST00000194123 606 ntBASIC15.06■□□□□ 0
Fam196aQ3USH1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.06■□□□□ 0
Fam196aQ3USH1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.06■□□□□ 0
Fam196aQ3USH1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Fam196aQ3USH1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Fam196aQ3USH1 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.06■□□□□ 0
Fam196aQ3USH1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Fam196aQ3USH1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.05■□□□□ 0
Fam196aQ3USH1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Fam196aQ3USH1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.05■□□□□ -0
Fam196aQ3USH1 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.05■□□□□ -0
Fam196aQ3USH1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.05■□□□□ -0
Fam196aQ3USH1 Gm9797-201ENSMUST00000052902 613 ntBASIC15.05■□□□□ -0
Fam196aQ3USH1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.05■□□□□ -0
Fam196aQ3USH1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Fam196aQ3USH1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Fam196aQ3USH1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.04■□□□□ -0
Fam196aQ3USH1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.04■□□□□ -0
Fam196aQ3USH1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Gm12957-201ENSMUST00000117835 377 ntBASIC15.04■□□□□ -0
Fam196aQ3USH1 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.04■□□□□ -0
Fam196aQ3USH1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.04■□□□□ -0
Fam196aQ3USH1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.04■□□□□ -0
Fam196aQ3USH1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Fam196aQ3USH1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.04■□□□□ -0
Fam196aQ3USH1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Fam196aQ3USH1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.04■□□□□ -0
Fam196aQ3USH1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.04■□□□□ -0
Fam196aQ3USH1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Fam196aQ3USH1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.04■□□□□ -0
Fam196aQ3USH1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Fam196aQ3USH1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.03■□□□□ -0
Fam196aQ3USH1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Fam196aQ3USH1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms