Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc190Q3URK1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Gm29518-201ENSMUST00000190858 372 ntBASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc190Q3URK1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc190Q3URK1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc190Q3URK1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc190Q3URK1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc190Q3URK1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms