Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Zfp560Q3URI6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Zfp560Q3URI6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Gm6443-201ENSMUST00000203599 874 ntBASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.11■□□□□ 0.01
Zfp560Q3URI6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms