Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Gm14701-201ENSMUST00000117156 348 ntBASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Naf1Q3UMQ8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Naf1Q3UMQ8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Naf1Q3UMQ8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Naf1Q3UMQ8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms