Protein–RNA interactions for Protein: Q3U6N9

UPF0488 protein C8orf33 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U6N9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Q3U6N9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Q3U6N9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Q3U6N9 Gm6415-201ENSMUST00000118488 348 ntBASIC14.3□□□□□ -0.12
Q3U6N9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.3□□□□□ -0.12
Q3U6N9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.3□□□□□ -0.12
Q3U6N9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.3□□□□□ -0.12
Q3U6N9 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.3□□□□□ -0.12
Q3U6N9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.3□□□□□ -0.12
Q3U6N9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.3□□□□□ -0.12
Q3U6N9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
Q3U6N9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Q3U6N9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Q3U6N9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Q3U6N9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.29□□□□□ -0.12
Q3U6N9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Q3U6N9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.29□□□□□ -0.12
Q3U6N9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.29□□□□□ -0.12
Q3U6N9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.29□□□□□ -0.12
Q3U6N9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.29□□□□□ -0.12
Q3U6N9 Gm27622-201ENSMUST00000183779 60 ntBASIC14.29□□□□□ -0.12
Q3U6N9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.29□□□□□ -0.12
Q3U6N9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.29□□□□□ -0.12
Q3U6N9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.29□□□□□ -0.12
Q3U6N9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Q3U6N9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Q3U6N9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Q3U6N9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.28□□□□□ -0.12
Q3U6N9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.28□□□□□ -0.12
Q3U6N9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.28□□□□□ -0.12
Q3U6N9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.28□□□□□ -0.12
Q3U6N9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Q3U6N9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.28□□□□□ -0.12
Q3U6N9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Q3U6N9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Q3U6N9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Q3U6N9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Q3U6N9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Q3U6N9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Q3U6N9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Q3U6N9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U6N9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U6N9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U6N9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U6N9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Q3U6N9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms