Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vars2Q3U2A8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Gm15393-201ENSMUST00000120499 219 ntBASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Gm6916-202ENSMUST00000205523 195 ntBASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vars2Q3U2A8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Gm12329-201ENSMUST00000120829 1007 ntBASIC18.52■□□□□ 0.56
Vars2Q3U2A8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Gm18307-201ENSMUST00000206864 949 ntBASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vars2Q3U2A8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vars2Q3U2A8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vars2Q3U2A8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vars2Q3U2A8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vars2Q3U2A8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Vars2Q3U2A8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.51■□□□□ 0.55
Vars2Q3U2A8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Gm27486-201ENSMUST00000184923 80 ntBASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Gm4959-201ENSMUST00000197271 1044 ntBASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.51■□□□□ 0.55
Vars2Q3U2A8 CT009713.10-202ENSMUST00000225734 696 ntBASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vars2Q3U2A8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Gm33320-201ENSMUST00000192232 530 ntBASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vars2Q3U2A8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms