Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nhej1Q3KNJ2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Gm8097-201ENSMUST00000117903 829 ntBASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nhej1Q3KNJ2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nhej1Q3KNJ2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nhej1Q3KNJ2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Nhej1Q3KNJ2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Nhej1Q3KNJ2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.08■□□□□ 0.17
Nhej1Q3KNJ2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nhej1Q3KNJ2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Gm27357-201ENSMUST00000183754 135 ntBASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nhej1Q3KNJ2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nhej1Q3KNJ2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms