Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm24543-201ENSMUST00000103867 82 ntBASIC10.96□□□□□ -0.65
Hspg2Q05793 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hspg2Q05793 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.96□□□□□ -0.65
Hspg2Q05793 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hspg2Q05793 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hspg2Q05793 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC10.96□□□□□ -0.65
Hspg2Q05793 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hspg2Q05793 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Hspg2Q05793 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hspg2Q05793 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hspg2Q05793 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hspg2Q05793 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.96□□□□□ -0.65
Hspg2Q05793 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hspg2Q05793 Gm3436-201ENSMUST00000179930 840 ntBASIC10.96□□□□□ -0.65
Hspg2Q05793 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hspg2Q05793 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.96□□□□□ -0.66
Hspg2Q05793 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Gm37424-201ENSMUST00000191727 561 ntBASIC10.96□□□□□ -0.66
Hspg2Q05793 Gm45841-201ENSMUST00000207700 164 ntBASIC10.96□□□□□ -0.66
Hspg2Q05793 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.96□□□□□ -0.66
Hspg2Q05793 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC10.96□□□□□ -0.66
Hspg2Q05793 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.96□□□□□ -0.66
Hspg2Q05793 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hspg2Q05793 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hspg2Q05793 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hspg2Q05793 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.95□□□□□ -0.66
Hspg2Q05793 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.95□□□□□ -0.66
Hspg2Q05793 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Hspg2Q05793 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.95□□□□□ -0.66
Hspg2Q05793 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Hspg2Q05793 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.95□□□□□ -0.66
Hspg2Q05793 Gm10478-201ENSMUST00000084451 396 ntBASIC10.95□□□□□ -0.66
Hspg2Q05793 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hspg2Q05793 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
Hspg2Q05793 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hspg2Q05793 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.95□□□□□ -0.66
Hspg2Q05793 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hspg2Q05793 Gm6244-201ENSMUST00000178732 841 ntBASIC10.95□□□□□ -0.66
Hspg2Q05793 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.95□□□□□ -0.66
Hspg2Q05793 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hspg2Q05793 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hspg2Q05793 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
Hspg2Q05793 Gm14722-201ENSMUST00000118943 689 ntBASIC10.95□□□□□ -0.66
Hspg2Q05793 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.95□□□□□ -0.66
Hspg2Q05793 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Hspg2Q05793 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
Hspg2Q05793 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.95□□□□□ -0.66
Hspg2Q05793 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.95□□□□□ -0.66
Hspg2Q05793 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hspg2Q05793 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hspg2Q05793 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hspg2Q05793 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.94□□□□□ -0.66
Hspg2Q05793 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.94□□□□□ -0.66
Hspg2Q05793 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hspg2Q05793 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Hspg2Q05793 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.94□□□□□ -0.66
Hspg2Q05793 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hspg2Q05793 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.93□□□□□ -0.66
Hspg2Q05793 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.93□□□□□ -0.66
Hspg2Q05793 Gm5035-201ENSMUST00000215581 927 ntBASIC10.93□□□□□ -0.66
Hspg2Q05793 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hspg2Q05793 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.93□□□□□ -0.66
Hspg2Q05793 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms