Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.3■□□□□ 0.2
CiitaP79621 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CiitaP79621 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CiitaP79621 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CiitaP79621 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.3■□□□□ 0.2
CiitaP79621 Gm14701-201ENSMUST00000117156 348 ntBASIC16.3■□□□□ 0.2
CiitaP79621 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.3■□□□□ 0.2
CiitaP79621 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.3■□□□□ 0.2
CiitaP79621 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.3■□□□□ 0.2
CiitaP79621 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.3■□□□□ 0.2
CiitaP79621 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CiitaP79621 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.3■□□□□ 0.2
CiitaP79621 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CiitaP79621 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.3■□□□□ 0.2
CiitaP79621 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CiitaP79621 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.29■□□□□ 0.2
CiitaP79621 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.29■□□□□ 0.2
CiitaP79621 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.29■□□□□ 0.2
CiitaP79621 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.29■□□□□ 0.2
CiitaP79621 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.29■□□□□ 0.2
CiitaP79621 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.29■□□□□ 0.2
CiitaP79621 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.29■□□□□ 0.2
CiitaP79621 Gm5312-201ENSMUST00000203728 547 ntBASIC16.29■□□□□ 0.2
CiitaP79621 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.29■□□□□ 0.2
CiitaP79621 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CiitaP79621 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CiitaP79621 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CiitaP79621 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CiitaP79621 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.29■□□□□ 0.2
CiitaP79621 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.29■□□□□ 0.2
CiitaP79621 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CiitaP79621 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
CiitaP79621 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CiitaP79621 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.28■□□□□ 0.2
CiitaP79621 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CiitaP79621 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CiitaP79621 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CiitaP79621 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.28■□□□□ 0.2
CiitaP79621 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CiitaP79621 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.28■□□□□ 0.2
CiitaP79621 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.28■□□□□ 0.2
CiitaP79621 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.28■□□□□ 0.2
CiitaP79621 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CiitaP79621 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.28■□□□□ 0.2
CiitaP79621 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.28■□□□□ 0.2
CiitaP79621 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
CiitaP79621 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CiitaP79621 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.28■□□□□ 0.2
CiitaP79621 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.28■□□□□ 0.2
CiitaP79621 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.28■□□□□ 0.2
CiitaP79621 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 BC037039-201ENSMUST00000192003 2205 ntBASIC16.27■□□□□ 0.2
CiitaP79621 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.27■□□□□ 0.2
CiitaP79621 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CiitaP79621 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms