Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Uba52P62984 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Gm25925-201ENSMUST00000158314 306 ntBASIC13.12□□□□□ -0.31
Uba52P62984 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.12□□□□□ -0.31
Uba52P62984 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.12□□□□□ -0.31
Uba52P62984 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.12□□□□□ -0.31
Uba52P62984 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.12□□□□□ -0.31
Uba52P62984 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Uba52P62984 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.12□□□□□ -0.31
Uba52P62984 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Uba52P62984 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Uba52P62984 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Uba52P62984 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.11□□□□□ -0.31
Uba52P62984 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.11□□□□□ -0.31
Uba52P62984 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.11□□□□□ -0.31
Uba52P62984 Gm2651-201ENSMUST00000203560 838 ntBASIC13.11□□□□□ -0.31
Uba52P62984 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Uba52P62984 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Uba52P62984 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.11□□□□□ -0.31
Uba52P62984 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Uba52P62984 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Uba52P62984 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.1□□□□□ -0.31
Uba52P62984 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Uba52P62984 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Uba52P62984 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Uba52P62984 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Gm13312-201ENSMUST00000119631 718 ntBASIC13.1□□□□□ -0.31
Uba52P62984 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Uba52P62984 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.1□□□□□ -0.31
Uba52P62984 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.1□□□□□ -0.31
Uba52P62984 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.1□□□□□ -0.31
Uba52P62984 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Gm44450-201ENSMUST00000199528 114 ntBASIC13.1□□□□□ -0.31
Uba52P62984 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Gm18421-201ENSMUST00000204122 625 ntBASIC13.1□□□□□ -0.31
Uba52P62984 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.1□□□□□ -0.31
Uba52P62984 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.1□□□□□ -0.31
Uba52P62984 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Uba52P62984 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Uba52P62984 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba52P62984 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Uba52P62984 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Uba52P62984 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms