Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Gm11355-201ENSMUST00000121120 306 ntBASIC10.77□□□□□ -0.69
Rpl39P62892 Gm7889-201ENSMUST00000185591 958 ntBASIC10.77□□□□□ -0.69
Rpl39P62892 Gm29257-201ENSMUST00000186115 639 ntBASIC10.77□□□□□ -0.69
Rpl39P62892 Gm37055-201ENSMUST00000191866 133 ntBASIC10.77□□□□□ -0.69
Rpl39P62892 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rpl39P62892 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rpl39P62892 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rpl39P62892 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rpl39P62892 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.77□□□□□ -0.69
Rpl39P62892 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Rpl39P62892 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpl39P62892 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Rpl39P62892 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Rpl39P62892 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.76□□□□□ -0.69
Rpl39P62892 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Rpl39P62892 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.76□□□□□ -0.69
Rpl39P62892 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Rpl39P62892 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rpl39P62892 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.76□□□□□ -0.69
Rpl39P62892 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.76□□□□□ -0.69
Rpl39P62892 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Rpl39P62892 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.76□□□□□ -0.69
Rpl39P62892 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rpl39P62892 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Rpl39P62892 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpl39P62892 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.76□□□□□ -0.69
Rpl39P62892 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Rpl39P62892 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Rpl39P62892 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.75□□□□□ -0.69
Rpl39P62892 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Rpl39P62892 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rpl39P62892 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.75□□□□□ -0.69
Rpl39P62892 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.75□□□□□ -0.69
Rpl39P62892 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.75□□□□□ -0.69
Rpl39P62892 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.75□□□□□ -0.69
Rpl39P62892 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rpl39P62892 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Rpl39P62892 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rpl39P62892 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.75□□□□□ -0.69
Rpl39P62892 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Rpl39P62892 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rpl39P62892 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms