Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.15□□□□□ -0.46
Lmo4P61969 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.15□□□□□ -0.46
Lmo4P61969 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.15□□□□□ -0.46
Lmo4P61969 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lmo4P61969 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.15□□□□□ -0.46
Lmo4P61969 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lmo4P61969 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Lmo4P61969 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lmo4P61969 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Lmo4P61969 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lmo4P61969 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lmo4P61969 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.15□□□□□ -0.47
Lmo4P61969 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Lmo4P61969 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Lmo4P61969 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.14□□□□□ -0.47
Lmo4P61969 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lmo4P61969 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lmo4P61969 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lmo4P61969 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Lmo4P61969 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Gm13223-201ENSMUST00000118609 747 ntBASIC12.14□□□□□ -0.47
Lmo4P61969 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Gm27321-201ENSMUST00000185021 205 ntBASIC12.14□□□□□ -0.47
Lmo4P61969 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Lmo4P61969 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.14□□□□□ -0.47
Lmo4P61969 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.14□□□□□ -0.47
Lmo4P61969 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Lmo4P61969 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.14□□□□□ -0.47
Lmo4P61969 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lmo4P61969 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.13□□□□□ -0.47
Lmo4P61969 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.13□□□□□ -0.47
Lmo4P61969 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lmo4P61969 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Lmo4P61969 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lmo4P61969 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lmo4P61969 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lmo4P61969 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.13□□□□□ -0.47
Lmo4P61969 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.13□□□□□ -0.47
Lmo4P61969 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.13□□□□□ -0.47
Lmo4P61969 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Lmo4P61969 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.13□□□□□ -0.47
Lmo4P61969 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.13□□□□□ -0.47
Lmo4P61969 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lmo4P61969 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Lmo4P61969 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Lmo4P61969 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lmo4P61969 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms