Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Cks1bP61025 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cks1bP61025 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1bP61025 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cks1bP61025 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.78□□□□□ -0.68
Cks1bP61025 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.78□□□□□ -0.68
Cks1bP61025 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1bP61025 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cks1bP61025 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.78□□□□□ -0.68
Cks1bP61025 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cks1bP61025 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Cks1bP61025 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.78□□□□□ -0.68
Cks1bP61025 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Cks1bP61025 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.78□□□□□ -0.68
Cks1bP61025 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Cks1bP61025 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cks1bP61025 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Cks1bP61025 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1bP61025 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1bP61025 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1bP61025 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1bP61025 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1bP61025 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1bP61025 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.77□□□□□ -0.68
Cks1bP61025 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1bP61025 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Cks1bP61025 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Cks1bP61025 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Gm11539-201ENSMUST00000119837 557 ntBASIC10.77□□□□□ -0.69
Cks1bP61025 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Arhgef4-208ENSMUST00000211073 171 ntBASIC10.77□□□□□ -0.69
Cks1bP61025 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Cks1bP61025 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
Cks1bP61025 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Cks1bP61025 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.77□□□□□ -0.69
Cks1bP61025 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Cks1bP61025 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Cks1bP61025 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms