Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Nphp4P59240 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nphp4P59240 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC20.27■□□□□ 0.84
Nphp4P59240 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Gm27989-201ENSMUST00000184721 107 ntBASIC20.27■□□□□ 0.84
Nphp4P59240 Mir6977-201ENSMUST00000184960 64 ntBASIC20.27■□□□□ 0.84
Nphp4P59240 Gm43703-201ENSMUST00000200523 763 ntBASIC20.27■□□□□ 0.84
Nphp4P59240 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC20.27■□□□□ 0.84
Nphp4P59240 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC20.27■□□□□ 0.84
Nphp4P59240 Shd-206ENSMUST00000225145 998 ntBASIC20.27■□□□□ 0.84
Nphp4P59240 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Nphp4P59240 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 AC124751.1-201ENSMUST00000222716 1408 ntBASIC20.27■□□□□ 0.84
Nphp4P59240 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nphp4P59240 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Nphp4P59240 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Nphp4P59240 Gm14780-201ENSMUST00000118387 2737 ntBASIC20.27■□□□□ 0.83
Nphp4P59240 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC20.27■□□□□ 0.83
Nphp4P59240 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC20.27■□□□□ 0.83
Nphp4P59240 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nphp4P59240 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nphp4P59240 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC20.27■□□□□ 0.83
Nphp4P59240 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC20.27■□□□□ 0.83
Nphp4P59240 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nphp4P59240 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nphp4P59240 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nphp4P59240 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nphp4P59240 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nphp4P59240 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nphp4P59240 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC20.26■□□□□ 0.83
Nphp4P59240 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nphp4P59240 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nphp4P59240 Gm27631-201ENSMUST00000184163 466 ntBASIC20.26■□□□□ 0.83
Nphp4P59240 CT025535.1-201ENSMUST00000227172 491 ntBASIC20.26■□□□□ 0.83
Nphp4P59240 AC149588.3-201ENSMUST00000227515 150 ntBASIC20.26■□□□□ 0.83
Nphp4P59240 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nphp4P59240 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nphp4P59240 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nphp4P59240 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nphp4P59240 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.25■□□□□ 0.83
Nphp4P59240 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nphp4P59240 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC20.25■□□□□ 0.83
Nphp4P59240 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Nphp4P59240 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Nphp4P59240 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Gm9182-201ENSMUST00000217829 639 ntBASIC20.25■□□□□ 0.83
Nphp4P59240 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC20.25■□□□□ 0.83
Nphp4P59240 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nphp4P59240 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC20.24■□□□□ 0.83
Nphp4P59240 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nphp4P59240 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Nphp4P59240 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nphp4P59240 Gm23547-201ENSMUST00000158210 271 ntBASIC20.24■□□□□ 0.83
Nphp4P59240 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Gm45453-201ENSMUST00000211758 853 ntBASIC20.24■□□□□ 0.83
Nphp4P59240 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nphp4P59240 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms