Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Tpm1P58771 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tpm1P58771 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Tpm1P58771 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Gm14722-201ENSMUST00000118943 689 ntBASIC16.84■□□□□ 0.29
Tpm1P58771 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.84■□□□□ 0.29
Tpm1P58771 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.84■□□□□ 0.29
Tpm1P58771 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.84■□□□□ 0.29
Tpm1P58771 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Tpm1P58771 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tpm1P58771 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tpm1P58771 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Tpm1P58771 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Tpm1P58771 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.83■□□□□ 0.28
Tpm1P58771 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.83■□□□□ 0.28
Tpm1P58771 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.83■□□□□ 0.28
Tpm1P58771 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tpm1P58771 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tpm1P58771 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Tpm1P58771 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tpm1P58771 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.82■□□□□ 0.28
Tpm1P58771 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.82■□□□□ 0.28
Tpm1P58771 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.82■□□□□ 0.28
Tpm1P58771 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Tpm1P58771 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.82■□□□□ 0.28
Tpm1P58771 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Tpm1P58771 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tpm1P58771 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.82■□□□□ 0.28
Tpm1P58771 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Tpm1P58771 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.81■□□□□ 0.28
Tpm1P58771 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tpm1P58771 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Gm15565-201ENSMUST00000118890 427 ntBASIC16.81■□□□□ 0.28
Tpm1P58771 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.81■□□□□ 0.28
Tpm1P58771 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Tpm1P58771 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tpm1P58771 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms