Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sssca1P56873 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sssca1P56873 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sssca1P56873 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sssca1P56873 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Sssca1P56873 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sssca1P56873 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sssca1P56873 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sssca1P56873 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sssca1P56873 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sssca1P56873 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sssca1P56873 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Sssca1P56873 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Sssca1P56873 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.2□□□□□ -0.46
Sssca1P56873 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.2□□□□□ -0.46
Sssca1P56873 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.2□□□□□ -0.46
Sssca1P56873 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sssca1P56873 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sssca1P56873 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sssca1P56873 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sssca1P56873 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sssca1P56873 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Sssca1P56873 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.19□□□□□ -0.46
Sssca1P56873 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Sssca1P56873 Gm29518-201ENSMUST00000190858 372 ntBASIC12.19□□□□□ -0.46
Sssca1P56873 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sssca1P56873 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.19□□□□□ -0.46
Sssca1P56873 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sssca1P56873 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sssca1P56873 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sssca1P56873 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sssca1P56873 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sssca1P56873 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sssca1P56873 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sssca1P56873 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.18□□□□□ -0.46
Sssca1P56873 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms