Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pdx1P52946 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdx1P52946 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Pdx1P52946 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdx1P52946 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.91□□□□□ -0.02
Pdx1P52946 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Pdx1P52946 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Pdx1P52946 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.91□□□□□ -0.02
Pdx1P52946 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Pdx1P52946 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Pdx1P52946 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.91□□□□□ -0.02
Pdx1P52946 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Pdx1P52946 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pdx1P52946 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pdx1P52946 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdx1P52946 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pdx1P52946 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.9□□□□□ -0.02
Pdx1P52946 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.9□□□□□ -0.02
Pdx1P52946 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pdx1P52946 Gm27525-201ENSMUST00000184465 107 ntBASIC14.9□□□□□ -0.02
Pdx1P52946 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.9□□□□□ -0.02
Pdx1P52946 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.9□□□□□ -0.02
Pdx1P52946 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.9□□□□□ -0.02
Pdx1P52946 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.9□□□□□ -0.02
Pdx1P52946 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pdx1P52946 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pdx1P52946 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pdx1P52946 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdx1P52946 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.9□□□□□ -0.02
Pdx1P52946 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pdx1P52946 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.89□□□□□ -0.03
Pdx1P52946 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.89□□□□□ -0.03
Pdx1P52946 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pdx1P52946 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pdx1P52946 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Pdx1P52946 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdx1P52946 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
Pdx1P52946 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdx1P52946 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms