Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.84□□□□□ -0.35
Hmga2P52927 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.84□□□□□ -0.35
Hmga2P52927 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.84□□□□□ -0.35
Hmga2P52927 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hmga2P52927 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Hmga2P52927 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.84□□□□□ -0.35
Hmga2P52927 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Grk6-207ENSMUST00000225925 2769 ntBASIC12.84□□□□□ -0.35
Hmga2P52927 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hmga2P52927 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hmga2P52927 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Hmga2P52927 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hmga2P52927 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Hmga2P52927 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hmga2P52927 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.83□□□□□ -0.36
Hmga2P52927 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.83□□□□□ -0.36
Hmga2P52927 Gm11950-201ENSMUST00000121615 838 ntBASIC12.83□□□□□ -0.36
Hmga2P52927 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.83□□□□□ -0.36
Hmga2P52927 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.83□□□□□ -0.36
Hmga2P52927 Mir3081-201ENSMUST00000175305 84 ntBASIC12.83□□□□□ -0.36
Hmga2P52927 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.83□□□□□ -0.36
Hmga2P52927 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hmga2P52927 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Hmga2P52927 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hmga2P52927 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Hmga2P52927 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.83□□□□□ -0.36
Hmga2P52927 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmga2P52927 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hmga2P52927 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.83□□□□□ -0.36
Hmga2P52927 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.83□□□□□ -0.36
Hmga2P52927 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hmga2P52927 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.82□□□□□ -0.36
Hmga2P52927 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.82□□□□□ -0.36
Hmga2P52927 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmga2P52927 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hmga2P52927 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hmga2P52927 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hmga2P52927 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.82□□□□□ -0.36
Hmga2P52927 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.82□□□□□ -0.36
Hmga2P52927 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmga2P52927 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmga2P52927 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.82□□□□□ -0.36
Hmga2P52927 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Hmga2P52927 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hmga2P52927 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.82□□□□□ -0.36
Hmga2P52927 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmga2P52927 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hmga2P52927 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms