Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GdnfP48540 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.23□□□□□ -0.29
GdnfP48540 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GdnfP48540 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GdnfP48540 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
GdnfP48540 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GdnfP48540 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.22□□□□□ -0.29
GdnfP48540 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
GdnfP48540 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GdnfP48540 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.22□□□□□ -0.29
GdnfP48540 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.22□□□□□ -0.29
GdnfP48540 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.22□□□□□ -0.29
GdnfP48540 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.22□□□□□ -0.29
GdnfP48540 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.22□□□□□ -0.29
GdnfP48540 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.22□□□□□ -0.29
GdnfP48540 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GdnfP48540 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GdnfP48540 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GdnfP48540 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
GdnfP48540 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GdnfP48540 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
GdnfP48540 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.21□□□□□ -0.29
GdnfP48540 Mir6404-201ENSMUST00000183699 94 ntBASIC13.21□□□□□ -0.29
GdnfP48540 Gm27867-201ENSMUST00000184778 125 ntBASIC13.21□□□□□ -0.29
GdnfP48540 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.21□□□□□ -0.29
GdnfP48540 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.21□□□□□ -0.29
GdnfP48540 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.21□□□□□ -0.29
GdnfP48540 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.21□□□□□ -0.29
GdnfP48540 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GdnfP48540 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GdnfP48540 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
GdnfP48540 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
GdnfP48540 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
GdnfP48540 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GdnfP48540 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GdnfP48540 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GdnfP48540 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GdnfP48540 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
GdnfP48540 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
GdnfP48540 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.2□□□□□ -0.3
GdnfP48540 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Rprl3-201ENSMUST00000157400 290 ntBASIC13.2□□□□□ -0.3
GdnfP48540 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.2□□□□□ -0.3
GdnfP48540 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
GdnfP48540 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
GdnfP48540 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
GdnfP48540 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
GdnfP48540 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.2□□□□□ -0.3
GdnfP48540 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GdnfP48540 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms