Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox2P48432 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Sox2P48432 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.16□□□□□ -0.14
Sox2P48432 Gm15794-201ENSMUST00000120182 631 ntBASIC14.16□□□□□ -0.14
Sox2P48432 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.16□□□□□ -0.14
Sox2P48432 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox2P48432 Gm45328-201ENSMUST00000210942 917 ntBASIC14.16□□□□□ -0.14
Sox2P48432 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox2P48432 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox2P48432 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox2P48432 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox2P48432 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sox2P48432 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox2P48432 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Gm19164-201ENSMUST00000210667 640 ntBASIC14.15□□□□□ -0.14
Sox2P48432 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.15□□□□□ -0.14
Sox2P48432 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.15□□□□□ -0.14
Sox2P48432 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.15□□□□□ -0.14
Sox2P48432 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Sox2P48432 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox2P48432 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox2P48432 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.15□□□□□ -0.14
Sox2P48432 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sox2P48432 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox2P48432 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sox2P48432 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox2P48432 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Carlr-201ENSMUST00000181515 2574 ntBASIC14.14□□□□□ -0.15
Sox2P48432 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Sox2P48432 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.14□□□□□ -0.15
Sox2P48432 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.14□□□□□ -0.15
Sox2P48432 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Gm17808-201ENSMUST00000200859 894 ntBASIC14.14□□□□□ -0.15
Sox2P48432 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.14□□□□□ -0.15
Sox2P48432 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox2P48432 Gm9172-201ENSMUST00000212092 954 ntBASIC14.14□□□□□ -0.15
Sox2P48432 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox2P48432 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox2P48432 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox2P48432 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox2P48432 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox2P48432 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms