Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-2P42586 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.82□□□□□ -0.2
Nkx2-2P42586 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Gm14140-201ENSMUST00000119999 995 ntBASIC13.82□□□□□ -0.2
Nkx2-2P42586 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Psmb5-202ENSMUST00000227257 622 ntBASIC13.82□□□□□ -0.2
Nkx2-2P42586 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.82□□□□□ -0.2
Nkx2-2P42586 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx2-2P42586 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Gm13597-201ENSMUST00000121239 375 ntBASIC13.81□□□□□ -0.2
Nkx2-2P42586 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.81□□□□□ -0.2
Nkx2-2P42586 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-2P42586 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Gm1401-201ENSMUST00000122048 772 ntBASIC13.8□□□□□ -0.2
Nkx2-2P42586 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-2P42586 Efs-202ENSMUST00000227037 2540 ntBASIC13.8□□□□□ -0.2
Nkx2-2P42586 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-2P42586 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-2P42586 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-2P42586 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-2P42586 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-2P42586 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.79□□□□□ -0.2
Nkx2-2P42586 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms