Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Gm14701-201ENSMUST00000117156 348 ntBASIC14.42□□□□□ -0.1
Tnfsf9P41274 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.42□□□□□ -0.1
Tnfsf9P41274 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
Tnfsf9P41274 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Rprl2-201ENSMUST00000157150 290 ntBASIC14.41□□□□□ -0.1
Tnfsf9P41274 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.41□□□□□ -0.1
Tnfsf9P41274 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf9P41274 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Gm9385-201ENSMUST00000117563 472 ntBASIC14.4□□□□□ -0.1
Tnfsf9P41274 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.4□□□□□ -0.1
Tnfsf9P41274 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf9P41274 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Tnfsf9P41274 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.39□□□□□ -0.11
Tnfsf9P41274 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Gm11745-201ENSMUST00000121669 448 ntBASIC14.39□□□□□ -0.11
Tnfsf9P41274 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Gm25925-201ENSMUST00000158314 306 ntBASIC14.39□□□□□ -0.11
Tnfsf9P41274 Rpph1-201ENSMUST00000175096 319 ntBASIC14.39□□□□□ -0.11
Tnfsf9P41274 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Tnfsf9P41274 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.39□□□□□ -0.11
Tnfsf9P41274 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms