Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox6P40645 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox6P40645 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.19□□□□□ -0.14
Sox6P40645 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Sox6P40645 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.19□□□□□ -0.14
Sox6P40645 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.19□□□□□ -0.14
Sox6P40645 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Sox6P40645 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox6P40645 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox6P40645 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox6P40645 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Sox6P40645 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.18□□□□□ -0.14
Sox6P40645 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.18□□□□□ -0.14
Sox6P40645 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Sox6P40645 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.18□□□□□ -0.14
Sox6P40645 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox6P40645 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.18□□□□□ -0.14
Sox6P40645 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox6P40645 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox6P40645 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox6P40645 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox6P40645 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox6P40645 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox6P40645 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Gm6257-201ENSMUST00000163864 910 ntBASIC14.17□□□□□ -0.14
Sox6P40645 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox6P40645 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.17□□□□□ -0.14
Sox6P40645 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox6P40645 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox6P40645 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox6P40645 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox6P40645 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Sox6P40645 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
Sox6P40645 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox6P40645 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox6P40645 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox6P40645 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox6P40645 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.16□□□□□ -0.14
Sox6P40645 Gm17971-201ENSMUST00000190239 806 ntBASIC14.16□□□□□ -0.14
Sox6P40645 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox6P40645 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox6P40645 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox6P40645 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox6P40645 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms