Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.14■□□□□ 0.34
KRT20P35900 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KRT20P35900 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT20P35900 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT20P35900 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.14■□□□□ 0.33
KRT20P35900 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 TERF1P1-201ENST00000311003 1181 ntBASIC17.14■□□□□ 0.33
KRT20P35900 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.14■□□□□ 0.33
KRT20P35900 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KRT20P35900 AC005521.1-201ENST00000393351 872 ntBASIC17.14■□□□□ 0.33
KRT20P35900 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.14■□□□□ 0.33
KRT20P35900 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT20P35900 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT20P35900 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
KRT20P35900 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT20P35900 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.14■□□□□ 0.33
KRT20P35900 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.14■□□□□ 0.33
KRT20P35900 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
KRT20P35900 AL031432.5-201ENST00000641059 760 ntBASIC17.14■□□□□ 0.33
KRT20P35900 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
KRT20P35900 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT20P35900 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT20P35900 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT20P35900 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT20P35900 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 HOXB1-202ENST00000577092 1414 ntBASIC17.13■□□□□ 0.33
KRT20P35900 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.13■□□□□ 0.33
KRT20P35900 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT20P35900 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT20P35900 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT20P35900 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT20P35900 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT20P35900 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT20P35900 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT20P35900 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT20P35900 AC010203.1-204ENST00000548782 407 ntBASIC17.13■□□□□ 0.33
KRT20P35900 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT20P35900 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT20P35900 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT20P35900 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 AC135776.1-201ENST00000319817 2481 ntBASIC17.13■□□□□ 0.33
KRT20P35900 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT20P35900 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
KRT20P35900 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KRT20P35900 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT20P35900 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT20P35900 BX664615.1-201ENST00000443558 458 ntBASIC17.12■□□□□ 0.33
KRT20P35900 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.12■□□□□ 0.33
KRT20P35900 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT20P35900 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.12■□□□□ 0.33
KRT20P35900 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
KRT20P35900 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT20P35900 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT20P35900 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT20P35900 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms