Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.02□□□□□ -0.33
Slc6a1P31648 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.02□□□□□ -0.33
Slc6a1P31648 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.02□□□□□ -0.33
Slc6a1P31648 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Slc6a1P31648 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Slc6a1P31648 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Slc6a1P31648 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.01□□□□□ -0.33
Slc6a1P31648 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Slc6a1P31648 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.01□□□□□ -0.33
Slc6a1P31648 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Slc6a1P31648 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slc6a1P31648 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Slc6a1P31648 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Slc6a1P31648 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13□□□□□ -0.33
Slc6a1P31648 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Slc6a1P31648 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13□□□□□ -0.33
Slc6a1P31648 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Slc6a1P31648 Gm45003-201ENSMUST00000205875 2158 ntBASIC13□□□□□ -0.33
Slc6a1P31648 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc6a1P31648 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
Slc6a1P31648 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.99□□□□□ -0.33
Slc6a1P31648 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.99□□□□□ -0.33
Slc6a1P31648 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Gm12008-201ENSMUST00000117791 755 ntBASIC12.99□□□□□ -0.33
Slc6a1P31648 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.99□□□□□ -0.33
Slc6a1P31648 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.99□□□□□ -0.33
Slc6a1P31648 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Slc6a1P31648 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Slc6a1P31648 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Slc6a1P31648 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Slc6a1P31648 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Slc6a1P31648 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc6a1P31648 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms