Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Col2a1P28481 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col2a1P28481 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Col2a1P28481 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col2a1P28481 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col2a1P28481 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.93■□□□□ 0.3
Col2a1P28481 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.93■□□□□ 0.3
Col2a1P28481 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col2a1P28481 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Gm3436-201ENSMUST00000179930 840 ntBASIC16.93■□□□□ 0.3
Col2a1P28481 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col2a1P28481 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.93■□□□□ 0.3
Col2a1P28481 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.93■□□□□ 0.3
Col2a1P28481 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col2a1P28481 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.93■□□□□ 0.3
Col2a1P28481 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Col2a1P28481 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col2a1P28481 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col2a1P28481 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Col2a1P28481 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.93■□□□□ 0.3
Col2a1P28481 Gm5866-201ENSMUST00000177881 973 ntBASIC16.93■□□□□ 0.3
Col2a1P28481 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col2a1P28481 Gm27838-201ENSMUST00000184829 128 ntBASIC16.93■□□□□ 0.3
Col2a1P28481 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.93■□□□□ 0.3
Col2a1P28481 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col2a1P28481 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col2a1P28481 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Col2a1P28481 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.92■□□□□ 0.3
Col2a1P28481 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col2a1P28481 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.92■□□□□ 0.3
Col2a1P28481 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.92■□□□□ 0.3
Col2a1P28481 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col2a1P28481 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 BC001981-202ENSMUST00000191393 1545 ntBASIC16.91■□□□□ 0.3
Col2a1P28481 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col2a1P28481 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Col2a1P28481 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Col2a1P28481 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.91■□□□□ 0.3
Col2a1P28481 AA619741-201ENSMUST00000195095 646 ntBASIC16.91■□□□□ 0.3
Col2a1P28481 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.91■□□□□ 0.3
Col2a1P28481 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col2a1P28481 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col2a1P28481 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Gm15321-201ENSMUST00000121290 288 ntBASIC16.9■□□□□ 0.3
Col2a1P28481 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.9■□□□□ 0.3
Col2a1P28481 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col2a1P28481 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms