Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CenpbP27790 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.34■□□□□ 0.85
CenpbP27790 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CenpbP27790 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.34■□□□□ 0.85
CenpbP27790 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.34■□□□□ 0.85
CenpbP27790 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.34■□□□□ 0.85
CenpbP27790 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CenpbP27790 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CenpbP27790 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
CenpbP27790 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CenpbP27790 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CenpbP27790 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CenpbP27790 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CenpbP27790 Gm26513-201ENSMUST00000181802 2489 ntBASIC20.33■□□□□ 0.85
CenpbP27790 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CenpbP27790 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CenpbP27790 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CenpbP27790 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CenpbP27790 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.33■□□□□ 0.85
CenpbP27790 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CenpbP27790 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CenpbP27790 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CenpbP27790 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CenpbP27790 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CenpbP27790 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC20.32■□□□□ 0.84
CenpbP27790 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.32■□□□□ 0.84
CenpbP27790 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.32■□□□□ 0.84
CenpbP27790 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CenpbP27790 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC20.32■□□□□ 0.84
CenpbP27790 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CenpbP27790 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 AC166574.6-201ENSMUST00000227889 1806 ntBASIC20.32■□□□□ 0.84
CenpbP27790 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CenpbP27790 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CenpbP27790 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CenpbP27790 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CenpbP27790 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CenpbP27790 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.31■□□□□ 0.84
CenpbP27790 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Gm38094-201ENSMUST00000195864 2978 ntBASIC20.31■□□□□ 0.84
CenpbP27790 Gm10252-201ENSMUST00000209541 832 ntBASIC20.31■□□□□ 0.84
CenpbP27790 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CenpbP27790 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CenpbP27790 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms