Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.5□□□□□ -0.41
Cxcl1P12850 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Gm12008-201ENSMUST00000117791 755 ntBASIC12.5□□□□□ -0.41
Cxcl1P12850 Gm15165-201ENSMUST00000118140 502 ntBASIC12.5□□□□□ -0.41
Cxcl1P12850 Gm4459-201ENSMUST00000118750 468 ntBASIC12.5□□□□□ -0.41
Cxcl1P12850 Olfr129-201ENSMUST00000122318 993 ntBASIC12.5□□□□□ -0.41
Cxcl1P12850 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cxcl1P12850 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cxcl1P12850 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.49□□□□□ -0.41
Cxcl1P12850 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.49□□□□□ -0.41
Cxcl1P12850 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.49□□□□□ -0.41
Cxcl1P12850 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.49□□□□□ -0.41
Cxcl1P12850 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Gm10252-201ENSMUST00000209541 832 ntBASIC12.49□□□□□ -0.41
Cxcl1P12850 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl1P12850 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl1P12850 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl1P12850 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl1P12850 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Carlr-201ENSMUST00000181515 2574 ntBASIC12.48□□□□□ -0.41
Cxcl1P12850 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl1P12850 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl1P12850 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl1P12850 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl1P12850 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl1P12850 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl1P12850 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Cxcl1P12850 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl1P12850 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcl1P12850 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms