Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Fv4P11370 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.58□□□□□ -0.08
Fv4P11370 Gm12134-201ENSMUST00000122109 520 ntBASIC14.58□□□□□ -0.08
Fv4P11370 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.58□□□□□ -0.08
Fv4P11370 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.58□□□□□ -0.08
Fv4P11370 Gm28033-201ENSMUST00000184224 96 ntBASIC14.58□□□□□ -0.08
Fv4P11370 Gm6089-201ENSMUST00000197666 938 ntBASIC14.58□□□□□ -0.08
Fv4P11370 Gm43767-201ENSMUST00000198933 381 ntBASIC14.58□□□□□ -0.08
Fv4P11370 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.58□□□□□ -0.08
Fv4P11370 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.58□□□□□ -0.08
Fv4P11370 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.58□□□□□ -0.08
Fv4P11370 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Fv4P11370 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.58□□□□□ -0.08
Fv4P11370 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Fv4P11370 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Fv4P11370 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.58□□□□□ -0.08
Fv4P11370 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fv4P11370 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Fv4P11370 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Fv4P11370 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Fv4P11370 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.57□□□□□ -0.08
Fv4P11370 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Fv4P11370 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.57□□□□□ -0.08
Fv4P11370 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.57□□□□□ -0.08
Fv4P11370 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.57□□□□□ -0.08
Fv4P11370 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.57□□□□□ -0.08
Fv4P11370 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.57□□□□□ -0.08
Fv4P11370 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Fv4P11370 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Fv4P11370 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fv4P11370 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Fv4P11370 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Fv4P11370 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Fv4P11370 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.56□□□□□ -0.08
Fv4P11370 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Gm25990-201ENSMUST00000102440 86 ntBASIC14.56□□□□□ -0.08
Fv4P11370 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Gm37153-201ENSMUST00000193637 231 ntBASIC14.56□□□□□ -0.08
Fv4P11370 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.56□□□□□ -0.08
Fv4P11370 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Fv4P11370 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.56□□□□□ -0.08
Fv4P11370 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.56□□□□□ -0.08
Fv4P11370 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.56□□□□□ -0.08
Fv4P11370 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fv4P11370 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Fv4P11370 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.55□□□□□ -0.08
Fv4P11370 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms