Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl3P10855 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ccl3P10855 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl3P10855 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl3P10855 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ccl3P10855 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.27□□□□□ -0.29
Ccl3P10855 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccl3P10855 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccl3P10855 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccl3P10855 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccl3P10855 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccl3P10855 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccl3P10855 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Ccl3P10855 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccl3P10855 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.26□□□□□ -0.29
Ccl3P10855 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.26□□□□□ -0.29
Ccl3P10855 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.26□□□□□ -0.29
Ccl3P10855 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccl3P10855 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Ccl3P10855 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccl3P10855 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ccl3P10855 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccl3P10855 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccl3P10855 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccl3P10855 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccl3P10855 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ccl3P10855 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccl3P10855 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ccl3P10855 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Syt7-204ENSMUST00000223586 1344 ntBASIC13.25□□□□□ -0.29
Ccl3P10855 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Gm27838-201ENSMUST00000184829 128 ntBASIC13.25□□□□□ -0.29
Ccl3P10855 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.25□□□□□ -0.29
Ccl3P10855 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.25□□□□□ -0.29
Ccl3P10855 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccl3P10855 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.25□□□□□ -0.29
Ccl3P10855 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccl3P10855 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccl3P10855 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.25□□□□□ -0.29
Ccl3P10855 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccl3P10855 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccl3P10855 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccl3P10855 Celf4-206ENSMUST00000224553 1729 ntBASIC13.25□□□□□ -0.29
Ccl3P10855 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccl3P10855 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ccl3P10855 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.24□□□□□ -0.29
Ccl3P10855 Gm9719-201ENSMUST00000162765 543 ntBASIC13.24□□□□□ -0.29
Ccl3P10855 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.24□□□□□ -0.29
Ccl3P10855 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccl3P10855 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms