Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Calm3P0DP28 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.35■□□□□ 0.37
Calm3P0DP28 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Calm3P0DP28 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
Calm3P0DP28 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.35■□□□□ 0.37
Calm3P0DP28 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.35■□□□□ 0.37
Calm3P0DP28 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Calm3P0DP28 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.35■□□□□ 0.37
Calm3P0DP28 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.35■□□□□ 0.37
Calm3P0DP28 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.35■□□□□ 0.37
Calm3P0DP28 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Calm3P0DP28 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Calm3P0DP28 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Calm3P0DP28 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
Calm3P0DP28 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.34■□□□□ 0.37
Calm3P0DP28 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.34■□□□□ 0.37
Calm3P0DP28 Gm44492-201ENSMUST00000197012 141 ntBASIC17.34■□□□□ 0.37
Calm3P0DP28 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.34■□□□□ 0.37
Calm3P0DP28 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Gm10175-201ENSMUST00000086013 645 ntBASIC17.34■□□□□ 0.37
Calm3P0DP28 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Calm3P0DP28 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Calm3P0DP28 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Calm3P0DP28 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Calm3P0DP28 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Calm3P0DP28 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Calm3P0DP28 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Calm3P0DP28 Sybu-209ENSMUST00000228639 4113 ntBASIC17.33■□□□□ 0.37
Calm3P0DP28 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
Calm3P0DP28 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Calm3P0DP28 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Calm3P0DP28 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Calm3P0DP28 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Calm3P0DP28 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Calm3P0DP28 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Calm3P0DP28 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.33■□□□□ 0.36
Calm3P0DP28 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Calm3P0DP28 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.33■□□□□ 0.36
Calm3P0DP28 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 Gm17271-201ENSMUST00000165535 355 ntBASIC17.33■□□□□ 0.36
Calm3P0DP28 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.33■□□□□ 0.36
Calm3P0DP28 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Calm3P0DP28 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Calm3P0DP28 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Calm3P0DP28 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.32■□□□□ 0.36
Calm3P0DP28 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Calm3P0DP28 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.32■□□□□ 0.36
Calm3P0DP28 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Calm3P0DP28 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Calm3P0DP28 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Calm3P0DP28 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Calm3P0DP28 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms