Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ly6c1P0CW02 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ly6c1P0CW02 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ly6c1P0CW02 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ly6c1P0CW02 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ly6c1P0CW02 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ly6c1P0CW02 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Celf4-206ENSMUST00000224553 1729 ntBASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Thap2-203ENSMUST00000218989 527 ntBASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ly6c1P0CW02 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Gm16198-201ENSMUST00000118766 670 ntBASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Gm17271-201ENSMUST00000165535 355 ntBASIC12.59□□□□□ -0.39
Ly6c1P0CW02 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Gm17872-201ENSMUST00000222550 532 ntBASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ly6c1P0CW02 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ly6c1P0CW02 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ly6c1P0CW02 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ly6c1P0CW02 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Gm9385-201ENSMUST00000117563 472 ntBASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Gm45878-201ENSMUST00000211839 241 ntBASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ly6c1P0CW02 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms