Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smim1P0C8K7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.4□□□□□ -0.74
Smim1P0C8K7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.4□□□□□ -0.74
Smim1P0C8K7 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.4□□□□□ -0.74
Smim1P0C8K7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Gm29707-201ENSMUST00000196325 491 ntBASIC10.4□□□□□ -0.74
Smim1P0C8K7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.4□□□□□ -0.74
Smim1P0C8K7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.4□□□□□ -0.74
Smim1P0C8K7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smim1P0C8K7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.39□□□□□ -0.75
Smim1P0C8K7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Gm13148-201ENSMUST00000118892 745 ntBASIC10.39□□□□□ -0.75
Smim1P0C8K7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.39□□□□□ -0.75
Smim1P0C8K7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smim1P0C8K7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms