Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NclP09405 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NclP09405 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
NclP09405 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
NclP09405 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Mir6956-201ENSMUST00000183598 62 ntBASIC22.32■■□□□ 1.16
NclP09405 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC22.32■■□□□ 1.16
NclP09405 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
NclP09405 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC22.32■■□□□ 1.16
NclP09405 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
NclP09405 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclP09405 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
NclP09405 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
NclP09405 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
NclP09405 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC22.31■■□□□ 1.16
NclP09405 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC22.31■■□□□ 1.16
NclP09405 Gm6018-201ENSMUST00000216090 1306 ntBASIC22.31■■□□□ 1.16
NclP09405 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclP09405 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
NclP09405 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
NclP09405 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC22.3■■□□□ 1.16
NclP09405 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC22.3■■□□□ 1.16
NclP09405 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Gm44616-201ENSMUST00000206417 1732 ntBASIC22.3■■□□□ 1.16
NclP09405 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
NclP09405 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
NclP09405 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NclP09405 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 CT025626.1-201ENSMUST00000223735 1455 ntBASIC22.29■■□□□ 1.16
NclP09405 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC22.29■■□□□ 1.16
NclP09405 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 AC163637.1-201ENSMUST00000215491 1894 ntBASIC22.29■■□□□ 1.16
NclP09405 Gm6973-201ENSMUST00000117080 721 ntBASIC22.29■■□□□ 1.16
NclP09405 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC22.29■■□□□ 1.16
NclP09405 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC22.29■■□□□ 1.16
NclP09405 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC22.29■■□□□ 1.16
NclP09405 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC22.29■■□□□ 1.16
NclP09405 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
NclP09405 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NclP09405 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC22.28■■□□□ 1.16
NclP09405 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NclP09405 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NclP09405 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms