Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxa4P06798 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hoxa4P06798 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxa4P06798 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hoxa4P06798 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxa4P06798 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.79□□□□□ -0.04
Hoxa4P06798 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Hoxa4P06798 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxa4P06798 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxa4P06798 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Hoxa4P06798 Gm27397-201ENSMUST00000184997 107 ntBASIC14.79□□□□□ -0.04
Hoxa4P06798 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.79□□□□□ -0.04
Hoxa4P06798 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxa4P06798 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.79□□□□□ -0.04
Hoxa4P06798 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.79□□□□□ -0.04
Hoxa4P06798 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxa4P06798 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxa4P06798 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.78□□□□□ -0.04
Hoxa4P06798 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.78□□□□□ -0.04
Hoxa4P06798 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.78□□□□□ -0.04
Hoxa4P06798 Mir1895-201ENSMUST00000122615 79 ntBASIC14.78□□□□□ -0.04
Hoxa4P06798 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Gm27494-201ENSMUST00000184735 189 ntBASIC14.78□□□□□ -0.04
Hoxa4P06798 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxa4P06798 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.78□□□□□ -0.04
Hoxa4P06798 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxa4P06798 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Hoxa4P06798 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Hoxa4P06798 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxa4P06798 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.04
Hoxa4P06798 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms