Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.68■□□□□ 0.1
P04214 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.68■□□□□ 0.1
P04214 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.68■□□□□ 0.1
P04214 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
P04214 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
P04214 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.67■□□□□ 0.1
P04214 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
P04214 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.67■□□□□ 0.1
P04214 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.67■□□□□ 0.1
P04214 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.67■□□□□ 0.1
P04214 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
P04214 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
P04214 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
P04214 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04214 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
P04214 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Gm21854-201ENSMUST00000179901 471 ntBASIC15.66■□□□□ 0.1
P04214 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
P04214 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
P04214 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
P04214 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04214 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
P04214 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
P04214 Gm13829-201ENSMUST00000119600 138 ntBASIC15.65■□□□□ 0.1
P04214 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.65■□□□□ 0.1
P04214 Gm10766-202ENSMUST00000194123 606 ntBASIC15.65■□□□□ 0.1
P04214 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.65■□□□□ 0.1
P04214 Gm44719-201ENSMUST00000206404 149 ntBASIC15.65■□□□□ 0.1
P04214 Gm45453-201ENSMUST00000211758 853 ntBASIC15.65■□□□□ 0.1
P04214 Gm9229-201ENSMUST00000222777 126 ntBASIC15.65■□□□□ 0.1
P04214 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
P04214 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.65■□□□□ 0.1
P04214 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
P04214 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
P04214 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
P04214 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms