Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.04□□□□□ -0.64
TcraP01849 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TcraP01849 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
TcraP01849 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TcraP01849 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TcraP01849 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TcraP01849 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TcraP01849 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TcraP01849 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TcraP01849 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TcraP01849 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.04□□□□□ -0.64
TcraP01849 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
TcraP01849 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TcraP01849 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
TcraP01849 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.03□□□□□ -0.64
TcraP01849 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TcraP01849 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TcraP01849 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TcraP01849 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TcraP01849 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TcraP01849 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TcraP01849 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TcraP01849 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.03□□□□□ -0.64
TcraP01849 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TcraP01849 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TcraP01849 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TcraP01849 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
TcraP01849 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
TcraP01849 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.02□□□□□ -0.64
TcraP01849 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TcraP01849 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TcraP01849 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
TcraP01849 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TcraP01849 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TcraP01849 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TcraP01849 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
TcraP01849 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.02□□□□□ -0.65
TcraP01849 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TcraP01849 Gm11539-201ENSMUST00000119837 557 ntBASIC11.02□□□□□ -0.65
TcraP01849 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.02□□□□□ -0.65
TcraP01849 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.02□□□□□ -0.65
TcraP01849 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
TcraP01849 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
TcraP01849 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.02□□□□□ -0.65
TcraP01849 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.02□□□□□ -0.65
TcraP01849 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
TcraP01849 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.02□□□□□ -0.65
TcraP01849 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TcraP01849 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.02□□□□□ -0.65
TcraP01849 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms