Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.73□□□□□ -0.37
Ifna1P01572 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.73□□□□□ -0.37
Ifna1P01572 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.73□□□□□ -0.37
Ifna1P01572 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.73□□□□□ -0.37
Ifna1P01572 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ifna1P01572 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.73□□□□□ -0.37
Ifna1P01572 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.73□□□□□ -0.37
Ifna1P01572 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.73□□□□□ -0.37
Ifna1P01572 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.73□□□□□ -0.37
Ifna1P01572 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.73□□□□□ -0.37
Ifna1P01572 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Ifna1P01572 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ifna1P01572 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.73□□□□□ -0.37
Ifna1P01572 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ifna1P01572 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ifna1P01572 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ifna1P01572 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Ifna1P01572 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.72□□□□□ -0.37
Ifna1P01572 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ifna1P01572 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Gm11950-201ENSMUST00000121615 838 ntBASIC12.72□□□□□ -0.37
Ifna1P01572 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.72□□□□□ -0.37
Ifna1P01572 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.72□□□□□ -0.37
Ifna1P01572 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.72□□□□□ -0.37
Ifna1P01572 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.72□□□□□ -0.37
Ifna1P01572 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.72□□□□□ -0.37
Ifna1P01572 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.72□□□□□ -0.37
Ifna1P01572 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ifna1P01572 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ifna1P01572 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ifna1P01572 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ifna1P01572 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.71□□□□□ -0.37
Ifna1P01572 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ifna1P01572 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ifna1P01572 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.71□□□□□ -0.37
Ifna1P01572 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.71□□□□□ -0.37
Ifna1P01572 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Gm6345-202ENSMUST00000180900 204 ntBASIC12.71□□□□□ -0.37
Ifna1P01572 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.71□□□□□ -0.37
Ifna1P01572 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.71□□□□□ -0.37
Ifna1P01572 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.71□□□□□ -0.37
Ifna1P01572 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ifna1P01572 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms