Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.53□□□□□ -0.24
Hdac3O88895 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.53□□□□□ -0.24
Hdac3O88895 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hdac3O88895 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hdac3O88895 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.52□□□□□ -0.24
Hdac3O88895 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Hdac3O88895 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Hdac3O88895 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Hdac3O88895 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Hdac3O88895 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.52□□□□□ -0.25
Hdac3O88895 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.52□□□□□ -0.25
Hdac3O88895 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdac3O88895 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdac3O88895 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdac3O88895 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdac3O88895 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.52□□□□□ -0.25
Hdac3O88895 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Hdac3O88895 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdac3O88895 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Hdac3O88895 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hdac3O88895 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdac3O88895 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Hdac3O88895 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Hdac3O88895 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Hdac3O88895 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Hdac3O88895 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hdac3O88895 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.51□□□□□ -0.25
Hdac3O88895 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hdac3O88895 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hdac3O88895 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.51□□□□□ -0.25
Hdac3O88895 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Hdac3O88895 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hdac3O88895 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.51□□□□□ -0.25
Hdac3O88895 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.51□□□□□ -0.25
Hdac3O88895 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.51□□□□□ -0.25
Hdac3O88895 Gm12134-201ENSMUST00000122109 520 ntBASIC13.51□□□□□ -0.25
Hdac3O88895 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.51□□□□□ -0.25
Hdac3O88895 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.51□□□□□ -0.25
Hdac3O88895 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hdac3O88895 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.51□□□□□ -0.25
Hdac3O88895 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hdac3O88895 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Hdac3O88895 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hdac3O88895 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hdac3O88895 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hdac3O88895 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Hdac3O88895 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.5□□□□□ -0.25
Hdac3O88895 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Hdac3O88895 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hdac3O88895 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.5□□□□□ -0.25
Hdac3O88895 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms