Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hcn1O88704 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.47□□□□□ -0.09
Hcn1O88704 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.47□□□□□ -0.09
Hcn1O88704 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.47□□□□□ -0.09
Hcn1O88704 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.47□□□□□ -0.09
Hcn1O88704 Gm44771-201ENSMUST00000206975 626 ntBASIC14.47□□□□□ -0.09
Hcn1O88704 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.47□□□□□ -0.09
Hcn1O88704 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hcn1O88704 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.47□□□□□ -0.09
Hcn1O88704 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hcn1O88704 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hcn1O88704 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hcn1O88704 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Hcn1O88704 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.46□□□□□ -0.09
Hcn1O88704 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Gm15173-201ENSMUST00000122049 433 ntBASIC14.46□□□□□ -0.09
Hcn1O88704 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hcn1O88704 Gm18733-201ENSMUST00000173950 856 ntBASIC14.46□□□□□ -0.09
Hcn1O88704 Mir5131-201ENSMUST00000175426 93 ntBASIC14.46□□□□□ -0.09
Hcn1O88704 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.46□□□□□ -0.09
Hcn1O88704 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.46□□□□□ -0.09
Hcn1O88704 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hcn1O88704 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.46□□□□□ -0.1
Hcn1O88704 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hcn1O88704 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.46□□□□□ -0.1
Hcn1O88704 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hcn1O88704 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Hcn1O88704 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Hcn1O88704 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Hcn1O88704 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hcn1O88704 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Hcn1O88704 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Gm8344-201ENSMUST00000119813 856 ntBASIC14.45□□□□□ -0.1
Hcn1O88704 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Hcn1O88704 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hcn1O88704 Gm2651-201ENSMUST00000203560 838 ntBASIC14.45□□□□□ -0.1
Hcn1O88704 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hcn1O88704 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.45□□□□□ -0.1
Hcn1O88704 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hcn1O88704 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms