Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cops6O88545 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cops6O88545 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.34■□□□□ 0.53
Cops6O88545 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.34■□□□□ 0.53
Cops6O88545 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.34■□□□□ 0.53
Cops6O88545 Gm8410-201ENSMUST00000117225 605 ntBASIC18.34■□□□□ 0.53
Cops6O88545 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.34■□□□□ 0.53
Cops6O88545 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.34■□□□□ 0.53
Cops6O88545 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cops6O88545 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.34■□□□□ 0.53
Cops6O88545 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cops6O88545 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cops6O88545 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cops6O88545 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cops6O88545 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cops6O88545 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cops6O88545 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cops6O88545 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cops6O88545 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cops6O88545 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cops6O88545 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.33■□□□□ 0.52
Cops6O88545 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Gm28630-201ENSMUST00000187806 498 ntBASIC18.33■□□□□ 0.52
Cops6O88545 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.33■□□□□ 0.52
Cops6O88545 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.33■□□□□ 0.52
Cops6O88545 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Cops6O88545 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.33■□□□□ 0.52
Cops6O88545 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cops6O88545 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
Cops6O88545 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.32■□□□□ 0.52
Cops6O88545 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Cops6O88545 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.32■□□□□ 0.52
Cops6O88545 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Gm6888-201ENSMUST00000221983 706 ntBASIC18.32■□□□□ 0.52
Cops6O88545 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.32■□□□□ 0.52
Cops6O88545 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cops6O88545 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.32■□□□□ 0.52
Cops6O88545 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cops6O88545 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.31■□□□□ 0.52
Cops6O88545 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cops6O88545 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cops6O88545 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms