Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Cops3O88543 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cops3O88543 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.54□□□□□ -0.24
Cops3O88543 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cops3O88543 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cops3O88543 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cops3O88543 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cops3O88543 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Gm4459-201ENSMUST00000118750 468 ntBASIC13.53□□□□□ -0.24
Cops3O88543 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.53□□□□□ -0.24
Cops3O88543 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.53□□□□□ -0.24
Cops3O88543 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.53□□□□□ -0.24
Cops3O88543 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.53□□□□□ -0.24
Cops3O88543 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.53□□□□□ -0.24
Cops3O88543 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.53□□□□□ -0.24
Cops3O88543 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.53□□□□□ -0.24
Cops3O88543 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cops3O88543 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.52□□□□□ -0.24
Cops3O88543 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cops3O88543 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cops3O88543 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cops3O88543 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cops3O88543 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cops3O88543 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
Cops3O88543 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cops3O88543 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.52□□□□□ -0.25
Cops3O88543 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.52□□□□□ -0.25
Cops3O88543 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.52□□□□□ -0.25
Cops3O88543 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cops3O88543 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cops3O88543 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.52□□□□□ -0.25
Cops3O88543 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.52□□□□□ -0.25
Cops3O88543 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.52□□□□□ -0.25
Cops3O88543 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cops3O88543 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.51□□□□□ -0.25
Cops3O88543 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cops3O88543 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms