Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vti1bO88384 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vti1bO88384 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.4□□□□□ -0.1
Vti1bO88384 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Vti1bO88384 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Vti1bO88384 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Gm12497-201ENSMUST00000138778 237 ntBASIC14.4□□□□□ -0.1
Vti1bO88384 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Vti1bO88384 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.4□□□□□ -0.1
Vti1bO88384 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.4□□□□□ -0.1
Vti1bO88384 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Vti1bO88384 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.4□□□□□ -0.1
Vti1bO88384 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1bO88384 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vti1bO88384 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vti1bO88384 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vti1bO88384 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.39□□□□□ -0.11
Vti1bO88384 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.39□□□□□ -0.11
Vti1bO88384 Gm4459-201ENSMUST00000118750 468 ntBASIC14.39□□□□□ -0.11
Vti1bO88384 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vti1bO88384 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.39□□□□□ -0.11
Vti1bO88384 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vti1bO88384 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vti1bO88384 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Vti1bO88384 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vti1bO88384 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Vti1bO88384 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vti1bO88384 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vti1bO88384 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vti1bO88384 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.38□□□□□ -0.11
Vti1bO88384 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.38□□□□□ -0.11
Vti1bO88384 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vti1bO88384 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Vti1bO88384 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Gm24589-201ENSMUST00000116692 94 ntBASIC14.38□□□□□ -0.11
Vti1bO88384 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.38□□□□□ -0.11
Vti1bO88384 Gm27459-201ENSMUST00000184860 107 ntBASIC14.38□□□□□ -0.11
Vti1bO88384 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.38□□□□□ -0.11
Vti1bO88384 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vti1bO88384 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vti1bO88384 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vti1bO88384 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms