Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mmp8O70138 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.36■□□□□ 0.53
Mmp8O70138 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Mmp8O70138 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Mmp8O70138 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.36■□□□□ 0.53
Mmp8O70138 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Gm25911-201ENSMUST00000157621 56 ntBASIC18.36■□□□□ 0.53
Mmp8O70138 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Mmp8O70138 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Mmp8O70138 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Mmp8O70138 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Mmp8O70138 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Mmp8O70138 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Mmp8O70138 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Mmp8O70138 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mmp8O70138 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp8O70138 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Mmp8O70138 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.35■□□□□ 0.53
Mmp8O70138 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.35■□□□□ 0.53
Mmp8O70138 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp8O70138 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.35■□□□□ 0.53
Mmp8O70138 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Mmp8O70138 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp8O70138 Gm16026-204ENSMUST00000162652 683 ntBASIC18.35■□□□□ 0.53
Mmp8O70138 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp8O70138 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.35■□□□□ 0.53
Mmp8O70138 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp8O70138 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp8O70138 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp8O70138 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Mmp8O70138 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp8O70138 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mmp8O70138 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Mmp8O70138 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Mmp8O70138 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Gm15427-201ENSMUST00000117288 531 ntBASIC18.34■□□□□ 0.53
Mmp8O70138 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.34■□□□□ 0.53
Mmp8O70138 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.34■□□□□ 0.53
Mmp8O70138 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mmp8O70138 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mmp8O70138 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mmp8O70138 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Mmp8O70138 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Mmp8O70138 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mmp8O70138 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.33■□□□□ 0.52
Mmp8O70138 Rpph1-201ENSMUST00000175096 319 ntBASIC18.33■□□□□ 0.52
Mmp8O70138 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.33■□□□□ 0.52
Mmp8O70138 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.33■□□□□ 0.52
Mmp8O70138 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.33■□□□□ 0.52
Mmp8O70138 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Mmp8O70138 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Mmp8O70138 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mmp8O70138 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp8O70138 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp8O70138 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp8O70138 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Mmp8O70138 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp8O70138 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.32■□□□□ 0.52
Mmp8O70138 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp8O70138 Gm20553-201ENSMUST00000204205 844 ntBASIC18.32■□□□□ 0.52
Mmp8O70138 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms